2P9N Structural Protein date Mar 26, 2007
title Crystal Structure Of Bovine Arp23 Complex Co-Crystallized W
authors B.J.Nolen, T.D.Pollard
compound source
Molecule: Actin-Like Protein 3
Chain: A
Synonym: Actin-Related Protein 3
Engineered: Yes
Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Gene: Actr3

Molecule: Actin-Like Protein 2
Chain: B
Synonym: Actin-Related Protein 3
Engineered: Yes

Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Gene: Actr2

Molecule: Actin-Related Protein 23 Complex Subunit 1b
Chain: C
Synonym: Arp23 Complex 41 Kda Subunit, P41-Arc
Engineered: Yes

Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Gene: Arpc1b

Molecule: Actin-Related Protein 23 Complex Subunit 2
Chain: D
Synonym: Arp23 Complex 34 Kda Subunit, P34-Arc
Engineered: Yes

Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Gene: Arpc2

Molecule: Actin-Related Protein 23 Complex Subunit 3
Chain: E
Synonym: Arp23 Complex 21 Kda Subunit, P21-Arc
Engineered: Yes

Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Gene: Arpc3

Molecule: Actin-Related Protein 23 Complex Subunit 4
Chain: F
Synonym: Arp23 Complex 20 Kda Subunit, P20-Arc
Engineered: Yes

Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Gene: Arpc4

Molecule: Actin-Related Protein 23 Complex Subunit 5
Chain: G
Synonym: Arp23 Complex 16 Kda Subunit, P16-Arc
Engineered: Yes

Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Gene: Arpc5
symmetry Space Group: P 21 21 21
R_factor 0.232 R_Free 0.272
crystal
cell
length a length b length c angle alpha angle beta angle gamma
111.132 129.272 203.857 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.85 Å
ligand ADP, CA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


B


C


D


E


F


G


Primary referenceInsights into the Influence of Nucleotides on Actin Family Proteins from Seven Structures of Arp2/3 Complex., Nolen BJ, Pollard TD, Mol Cell. 2007 May 11;26(3):449-457. PMID:17499050
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (276 Kb) [Save to disk]
  • Biological Unit Coordinates (2p9n.pdb1.gz) 269 Kb
  • LPC: Ligand-Protein Contacts for 2P9N
  • CSU: Contacts of Structural Units for 2P9N
  • Likely Quarternary Molecular Structure file(s) for 2P9N
  • Structure Factors (882 Kb)
  • Retrieve 2P9N in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2P9N from S2C, [Save to disk]
  • Re-refined 2p9n structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2P9N in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2P9N
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2P9N, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2p9n_E] [2p9n_C] [2p9n_A] [2p9n_D] [2p9n] [2p9n_B] [2p9n_F] [2p9n_G]
  • SWISS-PROT database: [Q58CQ2] [A7MB62] [P61157] [Q3MHR7] [Q3T035] [Q148J6] [Q3SYX9]
  • Domain organization of [ARC1B_BOVIN] [ARP2_BOVIN] [ARP3_BOVIN] [ARPC2_BOVIN] [ARPC3_BOVIN] [ARPC4_BOVIN] [ARPC5_BOVIN] by SWISSPFAM
  • Domains found in 2P9N: [ACTIN] [WD40 ] by SMART
  • Other resources with information on 2P9N
  • Community annotation for 2P9N at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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