2P9T	Transferase	date	Mar 26, 2007
title	Crystal Structure Of Phosphoglycerate Kinase-2 Bound To 3- Phosphoglycerate
authors	G.M.Sawyer, A.F.Monzingo, E.C.Poteet, J.D.Robertus
compound		source
Molecule: Phosphoglycerate Kinase, Testis Specific Chain: A Ec: 2.7.2.3 Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Strain: C3hhe Gene: Pgk2, Pgk-2 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgk-2-Pgex4t3
symmetry	Space Group: P 1 21 1	R_factor 0.221 R_Free 0.269
crystal cell	length a length b length c angle alpha angle beta angle gamma 42.100 64.300 72.200 90.00 97.80 90.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	3PG	enzyme	Transferase E.C.2.7.2.3 BRENDA
Gene Ontology	Chain Function Process Component A phosphoglycerate kinase acti...
Primary reference	X-ray analysis of phosphoglycerate kinase 2, a sperm-specific isoform from Mus musculus., Sawyer GM, Monzingo AF, Poteet EC, O'Brien DA, Robertus JD, Proteins. 2007 Nov 14;. PMID:18004764

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (71 Kb) [Save to disk] Biological Unit Coordinates (2p9t.pdb1.gz) 67 Kb LPC: Ligand-Protein Contacts for 2P9T CSU: Contacts of Structural Units for 2P9T Likely Quarternary Molecular Structure file(s) for 2P9T Structure Factors (193 Kb) Retrieve 2P9T in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2P9T from S2C, [Save to disk] Re-refined 2p9t structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2P9T in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2P9T

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2P9T, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2p9t_A] [2p9t] SWISS-PROT database: [P09041] Domain organization of [PGK2_MOUSE] by SWISSPFAM

Other resources with information on 2P9T

Community annotation for 2P9T at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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