2PAV Structural Protein date Mar 27, 2007
title Ternary Complex Of Profilin-Actin With The Last Poly-Pro Of
authors F.Ferron, G.Rebowski, R.Dominguez
compound source
Molecule: Actin, Alpha Skeletal Muscle
Chain: A
Synonym: Alpha-Actin-1
Organism_scientific: Oryctolagus Cuniculus
Organism_common: Rabbit
Organism_taxid: 9986
Other_details: Alpha Skeletal Muscle

Molecule: Profilin-1
Chain: P
Synonym: Profilin I
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Pfn1
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet29

Molecule: Vasodilator-Stimulated Phosphoprotein
Chain: V
Synonym: Vasp
Engineered: Yes

Synthetic: Yes
Other_details: This Sequence Occurs Naturally In Humans
symmetry Space Group: P 21 21 21
R_factor 0.158 R_Free 0.208
crystal
cell
length a length b length c angle alpha angle beta angle gamma
37.467 75.460 180.741 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand ATP, CA, HIC enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


P


Primary referenceStructural basis for the recruitment of profilin-actin complexes during filament elongation by Ena/VASP., Ferron F, Rebowski G, Lee SH, Dominguez R, EMBO J. 2007 Oct 4;. PMID:17914456
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (101 Kb) [Save to disk]
  • Biological Unit Coordinates (2pav.pdb1.gz) 95 Kb
  • LPC: Ligand-Protein Contacts for 2PAV
  • CSU: Contacts of Structural Units for 2PAV
  • Likely Quarternary Molecular Structure file(s) for 2PAV
  • Structure Factors (701 Kb)
  • Retrieve 2PAV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2PAV from S2C, [Save to disk]
  • Re-refined 2pav structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2PAV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2PAV
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2PAV, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2pav_P] [2pav] [2pav_V] [2pav_A]
  • SWISS-PROT database: [P68135] [P07737] [P50552]
  • Domain organization of [ACTS_RABIT] [PROF1_HUMAN] [VASP_HUMAN] by SWISSPFAM
  • Domains found in 2PAV: [ACTIN] [PROF ] by SMART
  • Other resources with information on 2PAV
  • Community annotation for 2PAV at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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