2PEM	Chaperone	date	Apr 03, 2007
title	Crystal Structure Of Rbcx In Complex With Substrate
authors	S.Saschenbrecker, A.Bracher, K.Vasudeva Rao, B.Vasudeva Rao, F.U M.Hayer-Hartl
compound		source
Molecule: Orf134 Chain: A, B, C, D, E, F Engineered: Yes		Organism_scientific: Synechococcus Sp. Organism_taxid: 32049 Strain: Pcc 7002 Gene: Rbcx Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet11a
Molecule: Rbcl Chain: R Fragment: Residues 459-465 Engineered: Yes		Synthetic: Yes Other_details: Synthetic Peptide With The Sequence Based On Bisphosphate Carboxylase Large Chain (Rbcl) From Synechococ Pcc 7002, Unp Entry Q44176, Rbl_synp2, Residues 459-465
symmetry	Space Group: P 41 21 2	R_factor 0.235 R_Free 0.264
crystal cell	length a length b length c angle alpha angle beta angle gamma 93.207 93.207 412.016 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.95 Å
Gene Ontology	Chain Function Process Component F, A, D, C, E, B
Primary reference	Structure and Function of RbcX, an Assembly Chaperone for Hexadecameric Rubisco., Saschenbrecker S, Bracher A, Rao KV, Rao BV, Hartl FU, Hayer-Hartl M, Cell. 2007 Jun 15;129(6):1189-200. PMID:17574029

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (109 Kb) [Save to disk] Biological Unit Coordinates (2pem.pdb1.gz) 37 Kb Biological Unit Coordinates (2pem.pdb2.gz) 35 Kb Biological Unit Coordinates (2pem.pdb3.gz) 34 Kb CSU: Contacts of Structural Units for 2PEM Likely Quarternary Molecular Structure file(s) for 2PEM Structure Factors (299 Kb) Retrieve 2PEM in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2PEM from S2C, [Save to disk] Re-refined 2pem structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2PEM in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2PEM

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2PEM, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2pem] [2pem_R] [2pem_D] [2pem_A] [2pem_B] [2pem_F] [2pem_C] [2pem_E] SWISS-PROT database: [Q44177] Domain organization of [Q44177_SYNP2] by SWISSPFAM

Other resources with information on 2PEM

Community annotation for 2PEM at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---