2PEN Chaperone date Apr 03, 2007
title Crystal Structure Of Rbcx, Crystal Form I
authors S.Saschenbrecker, A.Bracher, K.Vasudeva Rao, B.Vasudeva Rao, F.U M.Hayer-Hartl
compound source
Molecule: Orf134
Chain: A, B, C, D, E, F
Engineered: Yes
Organism_scientific: Synechococcus Sp.
Organism_taxid: 32049
Strain: Pcc 7002
Gene: Rbcx
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet11a
symmetry Space Group: P 41 21 2
R_factor 0.240 R_Free 0.262
crystal
cell
length a length b length c angle alpha angle beta angle gamma
93.335 93.335 411.990 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.80 Å
Gene
Ontology
ChainFunctionProcessComponent
F, A, D, C, E, B


Primary referenceStructure and Function of RbcX, an Assembly Chaperone for Hexadecameric Rubisco., Saschenbrecker S, Bracher A, Rao KV, Rao BV, Hartl FU, Hayer-Hartl M, Cell. 2007 Jun 15;129(6):1189-200. PMID:17574029
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (106 Kb) [Save to disk]
  • Biological Unit Coordinates (2pen.pdb1.gz) 35 Kb
  • Biological Unit Coordinates (2pen.pdb2.gz) 34 Kb
  • Biological Unit Coordinates (2pen.pdb3.gz) 33 Kb
  • Biological Unit Coordinates (2pen.pdb4.gz) 67 Kb
  • CSU: Contacts of Structural Units for 2PEN
  • Likely Quarternary Molecular Structure file(s) for 2PEN
  • Structure Factors (343 Kb)
  • Retrieve 2PEN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2PEN from S2C, [Save to disk]
  • Re-refined 2pen structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2PEN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2PEN
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2PEN, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2pen_C] [2pen_B] [2pen_D] [2pen] [2pen_A] [2pen_E] [2pen_F]
  • SWISS-PROT database: [Q44177]
  • Domain organization of [Q44177_SYNP2] by SWISSPFAM
  • Other resources with information on 2PEN
  • Community annotation for 2PEN at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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