2PFG	Oxidoreductase	date	Apr 04, 2007
title	Crystal Structure Of Human Cbr1 In Complex With Bigf2.
authors	D.Rauh, R.L.Bateman, K.M.Shokat
compound		source
Molecule: Carbonyl Reductase [Nadph] 1 Chain: A Synonym: Nadph-Dependent Carbonyl Reductase 1, Prostaglandi Reductase, Prostaglandin 9-Ketoreductase, 15-Hydroxyprostag Dehydrogenase [Nadp+]; Ec: 1.1.1.184, 1.1.1.189, 1.1.1.197 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Cbr1, Cbr, Crn Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet11b
symmetry	Space Group: P 21 21 21	R_factor 0.112 R_Free 0.164
crystal cell	length a length b length c angle alpha angle beta angle gamma 54.636 59.884 87.954 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.54 Å
ligand	CL, DDD, GOL, M0H, NAP	enzyme	Oxidoreductase E.C.1.1.1.184 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Glutathione traps formaldehyde by formation of a bicyclo[4.4.1]undecane adduct., Bateman R, Rauh D, Shokat KM, Org Biomol Chem. 2007 Oct 21;5(20):3363-7. Epub 2007 Aug 29. PMID:17912391

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (112 Kb) [Save to disk] Biological Unit Coordinates (2pfg.pdb1.gz) 106 Kb LPC: Ligand-Protein Contacts for 2PFG CSU: Contacts of Structural Units for 2PFG Likely Quarternary Molecular Structure file(s) for 2PFG Structure Factors (298 Kb) Retrieve 2PFG in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2PFG from S2C, [Save to disk] Re-refined 2pfg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2PFG in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2PFG

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2PFG, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2pfg] [2pfg_A] SWISS-PROT database: [P16152] Domain organization of [CBR1_HUMAN] by SWISSPFAM

Other resources with information on 2PFG

Community annotation for 2PFG at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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