2PJ4	Hydrolase	date	Apr 15, 2007
title	Crystal Structure Of Activated Porcine Pancreatic Carboxypep [((R)-Benzyloxycarbonylamino-Cyclohexyl-Methyl)-Hydroxy- Phosphinoyloxy]-(3-Guanidino-Phenyl)-Acetic Acid Complex
authors	M.Adler, M.Whitlow
compound		source
Molecule: Carboxypeptidase B Chain: A, B Fragment: Catalytic Domain Ec: 3.4.17.2		Organism_scientific: Sus Scrofa Organism_common: Pig Organism_taxid: 9823
symmetry	Space Group: P 41 21 2	R_factor 0.215 R_Free 0.265
crystal cell	length a length b length c angle alpha angle beta angle gamma 90.069 90.069 173.666 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	414, ZN	enzyme	Hydrolase E.C.3.4.17.2 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structures of potent selective peptide mimetics bound to carboxypeptidase B., Adler M, Buckman B, Bryant J, Chang Z, Chu K, Emayan K, Hrvatin P, Islam I, Morser J, Sukovich D, West C, Yuan S, Whitlow M, Acta Crystallogr D Biol Crystallogr. 2008 Feb;64(Pt 2):149-57. Epub 2008, Jan 16. PMID:18219114

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (109 Kb) [Save to disk] Biological Unit Coordinates (2pj4.pdb1.gz) 54 Kb Biological Unit Coordinates (2pj4.pdb2.gz) 53 Kb LPC: Ligand-Protein Contacts for 2PJ4 CSU: Contacts of Structural Units for 2PJ4 Likely Quarternary Molecular Structure file(s) for 2PJ4 Structure Factors (303 Kb) Retrieve 2PJ4 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2PJ4 from S2C, [Save to disk] Re-refined 2pj4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2PJ4 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2PJ4

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2PJ4, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2pj4_A] [2pj4] [2pj4_B] SWISS-PROT database: [P09955] Domain organization of [CBPB1_PIG] by SWISSPFAM Domain found in 2PJ4: [Zn_pept ] by SMART

Other resources with information on 2PJ4

Community annotation for 2PJ4 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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