2PJY Structural basis for cooperative assembly of the TGF-beta signaling complex date
authors Groppe, J., Zubieta, C.
compound source
symmetry
R_factor
R_Free 0.297
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.00
note 2PJY is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A


B


C


Primary referenceCooperative assembly of TGF-beta superfamily signaling complexes is mediated by two disparate mechanisms and distinct modes of receptor binding., Groppe J, Hinck CS, Samavarchi-Tehrani P, Zubieta C, Schuermann JP, Taylor AB, Schwarz PM, Wrana JL, Hinck AP, Mol Cell. 2008 Feb 1;29(2):157-68. PMID:18243111
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (53 Kb) [Save to disk]
  • Biological Unit Coordinates (2pjy.pdb1.gz) 89 Kb
  • CSU: Contacts of Structural Units for 2PJY
  • Likely Quarternary Molecular Structure file(s) for 2PJY
  • Structure Factors (55 Kb)
  • Retrieve 2PJY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2PJY from S2C, [Save to disk]
  • Re-refined 2pjy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2PJY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2PJY
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2PJY, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2pjy_C] [2pjy_B] [2pjy_A] [2pjy]
  • SWISS-PROT database: [P10600] [P36897] [P37173]
  • Domain organization of [TGFB3_HUMAN] [TGFR1_HUMAN] [TGFR2_HUMAN] by SWISSPFAM
  • Domain found in 2PJY: [TGFB ] by SMART
    • Other resources with information on 2PJY
  • Community annotation for 2PJY at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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