2PL2 Protein Binding date Apr 18, 2007
title Crystal Structure Of Ttc0263: A Thermophilic Tpr Protein In Thermophilus Hb27
authors H.Lim, K.Kim, D.Han, J.Oh
compound source
Molecule: Hypothetical Conserved Protein Ttc0263
Chain: A, B
Fragment: Residues 25-241
Engineered: Yes
Organism_scientific: Thermus Thermophilus
Organism_taxid: 262724
Strain: Hb27
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3) Codon Plus Ril
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet 24a(+)
symmetry Space Group: C 1 2 1
R_factor 0.236 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
90.070 71.020 77.720 90.00 122.97 90.00
method X-Ray Diffractionresolution 2.50 Å
Primary referenceCrystal structure of TTC0263, a thermophilic TPR protein from Thermus thermophilus HB27., Lim H, Kim K, Han D, Oh J, Kim Y, Mol Cells. 2007 Aug 31;24(1):27-36. PMID:17846496
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (66 Kb) [Save to disk]
  • Biological Unit Coordinates (2pl2.pdb1.gz) 61 Kb
  • CSU: Contacts of Structural Units for 2PL2
  • Likely Quarternary Molecular Structure file(s) for 2PL2
  • Structure Factors (850 Kb)
  • Retrieve 2PL2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2PL2 from S2C, [Save to disk]
  • Re-refined 2pl2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2PL2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2PL2
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2PL2, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2pl2] [2pl2_A] [2pl2_B]
  • SWISS-PROT database: [Q72L02]
  • Domain organization of [Q72L02_THET2] by SWISSPFAM
  • Domain found in 2PL2: [TPR ] by SMART
  • Other resources with information on 2PL2
  • Community annotation for 2PL2 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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