2PLT Electron Transport date May 06, 1993
title Structure Determination Of Plastocyanin From A Crystal Speci Hemihedral Twinning Fraction Of One-Half
authors M.R.Redinbo, S.Merchant, T.O.Yeates
compound source
Molecule: Plastocyanin
Chain: A
Engineered: Yes
 Organism_scientific: Chlamydomonas Reinhardtii
Organism_taxid: 3055
symmetry Space Group: P 32
R_factor 0.168 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
61.800 61.800 25.200 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.50 Å
ligand CA, CU enzyme
related structures by homologous chain: 1PLC, 1PNC
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe 1.5-A crystal structure of plastocyanin from the green alga Chlamydomonas reinhardtii., Redinbo MR, Cascio D, Choukair MK, Rice D, Merchant S, Yeates TO, Biochemistry. 1993 Oct 12;32(40):10560-7. PMID:8399201
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (21 Kb) [Save to disk]
  • Biological Unit Coordinates (2plt.pdb1.gz) 17 Kb
  • LPC: Ligand-Protein Contacts for 2PLT
  • CSU: Contacts of Structural Units for 2PLT
  • Likely Quarternary Molecular Structure file(s) for 2PLT
  • Retrieve 2PLT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2PLT from S2C, [Save to disk]
    • View 2PLT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2PLT
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Conformational Epitope Prediction for 2PLT from the CEP Server.
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2PLT, from MSDmotif at EBI
  • Genome occurence of 2PLT's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d2plt__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2plt_A] [2plt]
  • SWISS-PROT database: [P18068]
  • Domain organization of [PLAS_CHLRE] by SWISSPFAM
    • Other resources with information on 2PLT
  • Community annotation for 2PLT at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Domain movements in 2PLT from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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