2PPQ Transferase date Apr 30, 2007
title Crystal Structure Of The Homoserine Kinase From Agrobacteriu Tumefaciens
authors R.Zhang, X.Xu, H.Zheng, A.Savchenko, A.Edwards, A.Joachimiak, Midw Center For Structural Genomics (Mcsg)
compound source
Molecule: Homoserine Kinase
Chain: A
Synonym: Hsk, Hk
Ec: 2.7.1.39
Engineered: Yes
Organism_scientific: Agrobacterium Tumefaciens Str.
Organism_taxid: 176299
Strain: C58
Atcc: 33970
Gene: Thrb, Atu0775, Agr_c_1416
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pdm68
symmetry Space Group: C 2 2 21
R_factor 0.187 R_Free 0.235
crystal
cell
length a length b length c angle alpha angle beta angle gamma
61.338 100.619 134.310 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand MG, MSE, PO4 enzyme Transferase E.C.2.7.1.39 BRENDA
Gene AGR (C. caroliniana)
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (60 Kb) [Save to disk]
  • Biological Unit Coordinates (2ppq.pdb1.gz) 107 Kb
  • LPC: Ligand-Protein Contacts for 2PPQ
  • CSU: Contacts of Structural Units for 2PPQ
  • Likely Quarternary Molecular Structure file(s) for 2PPQ
  • Structure Factors (220 Kb)
  • Retrieve 2PPQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2PPQ from S2C, [Save to disk]
  • Re-refined 2ppq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2PPQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2PPQ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2PPQ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ppq_A] [2ppq]
  • SWISS-PROT database: [Q8UHA8]
  • Domain organization of [KHSE_AGRT5] by SWISSPFAM
  • Other resources with information on 2PPQ
  • Community annotation for 2PPQ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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