2PWZ Oxidoreductase date May 14, 2007
title Crystal Structure Of The Apo Form Of E.Coli Malate Dehydroge
authors C.A.G.Soderberg, T.A.Clarke, D.J.Richardson, A.M.Hemmings
compound source
Molecule: Malate Dehydrogenase
Chain: A, C, E, G
Ec: 1.1.1.37
Organism_scientific: Escherichia Coli
Organism_taxid: 83333
Strain: K12
symmetry Space Group: C 1 2 1
R_factor 0.199 R_Free 0.246
crystal
cell
length a length b length c angle alpha angle beta angle gamma
146.466 52.485 170.200 90.00 102.28 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand
enzyme Oxidoreductase E.C.1.1.1.37 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, C, G, E


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (190 Kb) [Save to disk]
  • Biological Unit Coordinates (2pwz.pdb1.gz) 94 Kb
  • Biological Unit Coordinates (2pwz.pdb2.gz) 94 Kb
  • CSU: Contacts of Structural Units for 2PWZ
  • Likely Quarternary Molecular Structure file(s) for 2PWZ
  • Structure Factors (512 Kb)
  • Retrieve 2PWZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2PWZ from S2C, [Save to disk]
  • Re-refined 2pwz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2PWZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2PWZ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2PWZ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2pwz_A] [2pwz_E] [2pwz_C] [2pwz_G] [2pwz]
  • SWISS-PROT database: [P61889]
  • Domain organization of [MDH_ECOLI] by SWISSPFAM
  • Other resources with information on 2PWZ
  • Community annotation for 2PWZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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