2PYZ Hydrolase date May 17, 2007
title Crystal Structure Of The Complex Of Proteinase K With Aurami Resolution
authors A.K.Singh, N.Singh, M.Sinha, S.Sharma, A.Bhushan, P.Kaur, T.P.Sing
compound source
Molecule: Proteinase K
Chain: A
Fragment: Proteinase K
Synonym: Tritirachium Alkaline Proteinase, Endopeptidase K
Ec: 3.4.21.64
 Organism_scientific: Engyodontium Album
Organism_taxid: 37998
symmetry Space Group: P 43 21 2
R_factor 0.156 R_Free 0.205
crystal
cell
length a length b length c angle alpha angle beta angle gamma
68.299 68.299 108.379 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.79 Å
ligand AU4, CA, NO3 enzyme Hydrolase E.C.3.4.21.64 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (52 Kb) [Save to disk]
  • Biological Unit Coordinates (2pyz.pdb1.gz) 47 Kb
  • LPC: Ligand-Protein Contacts for 2PYZ
  • CSU: Contacts of Structural Units for 2PYZ
  • Likely Quarternary Molecular Structure file(s) for 2PYZ
  • Retrieve 2PYZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2PYZ from S2C, [Save to disk]
    • View 2PYZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2PYZ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2PYZ, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2pyz] [2pyz_A]
  • SWISS-PROT database: [P06873]
  • Domain organization of [PRTK_TRIAL] by SWISSPFAM
    • Other resources with information on 2PYZ
  • Community annotation for 2PYZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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