2PZP Transferase date May 18, 2007
title Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Ha The Pathogenic K526e Mutation Responsible For Crouzon Syndr
authors H.Chen, M.Mohammadi
compound source
Molecule: Fibroblast Growth Factor Receptor 2
Chain: A, B
Fragment: Kinase Domain
Synonym: Fgfr-2, Keratinocyte Growth Factor Receptor 2, Cd3 Antigen;
Ec: 2.7.10.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Fgfr2, Bek, Ksam
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 (De3) Plys-S
symmetry Space Group: P 21 21 2
R_factor 0.214 R_Free 0.251
crystal
cell
length a length b length c angle alpha angle beta angle gamma
105.410 114.021 64.392 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.40 Å
ligand ACP, MG, SO4 enzyme Transferase E.C.2.7.10.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceA molecular brake in the kinase hinge region regulates the activity of receptor tyrosine kinases., Chen H, Ma J, Li W, Eliseenkova AV, Xu C, Neubert TA, Miller WT, Mohammadi M, Mol Cell. 2007 Sep 7;27(5):717-30. PMID:17803937
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (99 Kb) [Save to disk]
  • Biological Unit Coordinates (2pzp.pdb1.gz) 93 Kb
  • LPC: Ligand-Protein Contacts for 2PZP
  • CSU: Contacts of Structural Units for 2PZP
  • Likely Quarternary Molecular Structure file(s) for 2PZP
  • Structure Factors (431 Kb)
  • Retrieve 2PZP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2PZP from S2C, [Save to disk]
  • Re-refined 2pzp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2PZP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2PZP
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2PZP, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2pzp] [2pzp_B] [2pzp_A]
  • SWISS-PROT database: [P21802]
  • Domain organization of [FGFR2_HUMAN] by SWISSPFAM
  • Domain found in 2PZP: [TyrKc ] by SMART
  • Other resources with information on 2PZP
  • Community annotation for 2PZP at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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