2Q05 Hydrolase date May 18, 2007
title Crystal Structure Of Tyrser Protein Phosphatase From Vaccin Wr
authors J.Osipiuk, T.Skarina, O.Kagan, A.Savchenko, A.Edwards, A.Joachimi Midwest Center For Structural Genomics (Mcsg)
compound source
Molecule: Dual Specificity Protein Phosphatase
Chain: A, B, C, D
Synonym: Late Protein H1
Ec: 3.1.3.48, 3.1.3.16
Engineered: Yes
Organism_scientific: Vaccinia Virus Wr
Organism_taxid: 10254
Strain: Wr (Western Reserve), Vacv
Gene: H1l, Vacwr099
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b
symmetry Space Group: P 21 3
R_factor 0.191 R_Free 0.218
crystal
cell
length a length b length c angle alpha angle beta angle gamma
169.246 169.246 169.246 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.57 Å
ligand MSE enzyme Hydrolase E.C.3.1.3.48 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B
  • protein tyrosine phosphatase...


  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (127 Kb) [Save to disk]
  • Biological Unit Coordinates (2q05.pdb1.gz) 349 Kb
  • LPC: Ligand-Protein Contacts for 2Q05
  • CSU: Contacts of Structural Units for 2Q05
  • Likely Quarternary Molecular Structure file(s) for 2Q05
  • Structure Factors (1091 Kb)
  • Retrieve 2Q05 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2Q05 from S2C, [Save to disk]
  • Re-refined 2q05 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2Q05 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2Q05
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2Q05, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2q05] [2q05_A] [2q05_C] [2q05_B] [2q05_D]
  • SWISS-PROT database: [P07239]
  • Domain organization of [DUSP_VACCW] by SWISSPFAM
  • Domain found in 2Q05: [DSPc ] by SMART
  • Other resources with information on 2Q05
  • Community annotation for 2Q05 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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