2Q5T Full-length Cholix toxin from Vibrio Cholerae date
authors Jorgensen, R., Fieldhouse, R.J., Merrill, A.R.
compound source
symmetry
R_factor
R_Free 0.23925
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.10
ligand CL, EDO enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • toxin activity


  • Primary referenceCholix toxin, a novel ADP-ribosylating factor from vibrio cholerae., Jorgensen R, Purdy AE, Fieldhouse RJ, Kimber MS, Bartlett DH, Rod Merrill A, J Biol Chem. 2008 Feb 25;. PMID:18276581
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (112 Kb) [Save to disk]
  • Biological Unit Coordinates (2q5t.pdb1.gz) 104 Kb
  • LPC: Ligand-Protein Contacts for 2Q5T
  • CSU: Contacts of Structural Units for 2Q5T
  • Likely Quarternary Molecular Structure file(s) for 2Q5T
  • Structure Factors (319 Kb)
  • Retrieve 2Q5T in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2Q5T from S2C, [Save to disk]
  • Re-refined 2q5t structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2Q5T in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2Q5T
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2Q5T, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2q5t_A] [2q5t]
  • SWISS-PROT database: [Q5EK40]
  • Belongs to the pseudomonas exotoxin a (p-exoa) family according to TCDB.
  • Domain organization of [Q5EK40_VIBCH] by SWISSPFAM
  • Other resources with information on 2Q5T
  • Community annotation for 2Q5T at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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