2QC6 Transferase date Jun 19, 2007
title Protein Kinase Ck2 In Complex With Dbc
authors R.Battistutta
compound source
Molecule: Casein Kinase II Subunit Alpha
Chain: A
Synonym: Ck II, Ck2-Alpha
Ec: 2.7.11.1
Engineered: Yes
Organism_scientific: Zea Mays
Organism_taxid: 4577
Gene: Ack2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 1 2 1
R_factor 0.214 R_Free 0.268
crystal
cell
length a length b length c angle alpha angle beta angle gamma
141.676 60.252 44.901 90.00 103.00 90.00
method X-Ray Diffractionresolution 1.85 Å
ligand CSO, G12 enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCoumarin as Attractive Casein Kinase 2 (CK2) Inhibitor Scaffold: An Integrate Approach To Elucidate the Putative Binding Motif and Explain Structure-Activity Relationships., Chilin A, Battistutta R, Bortolato A, Cozza G, Zanatta S, Poletto G, Mazzorana M, Zagotto G, Uriarte E, Guiotto A, Pinna LA, Meggio F, Moro S, J Med Chem. 2008 Feb 28;51(4):752-759. Epub 2008 Feb 6. PMID:18251491
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (64 Kb) [Save to disk]
  • Biological Unit Coordinates (2qc6.pdb1.gz) 60 Kb
  • LPC: Ligand-Protein Contacts for 2QC6
  • CSU: Contacts of Structural Units for 2QC6
  • Likely Quarternary Molecular Structure file(s) for 2QC6
  • Structure Factors (517 Kb)
  • Retrieve 2QC6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2QC6 from S2C, [Save to disk]
  • Re-refined 2qc6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2QC6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2QC6
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2QC6, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2qc6_A] [2qc6]
  • SWISS-PROT database: [P28523]
  • Domain organization of [CSK2A_MAIZE] by SWISSPFAM
  • Domain found in 2QC6: [S_TKc ] by SMART
  • Other resources with information on 2QC6
  • Community annotation for 2QC6 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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