2QIE Transferase date Jul 04, 2007
title Staphylococcus Aureus Molybdopterin Synthase In Complex With Z
authors J.N.Daniels, H.Schindelin
compound source
Molecule: Molybdopterin-Converting Factor Subunit 2
Chain: A, H, K, E
Synonym: Mpt Synthase Subunit 2, Molybdopterin Synthase Sub Molybdenum Cofactor Biosynthesis Protein E, Molybdopterin-C Factor Large Subunit;
Engineered: Yes
Organism_scientific: Staphylococcus Aureus
Organism_taxid: 1280
Gene: Moae
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet11b

Molecule: Molybdopterin Synthase Small Subunit
Chain: B, G, J, D
Engineered: Yes

Organism_scientific: Staphylococcus Aureus
Organism_taxid: 1280
Gene: Moad
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet11b
symmetry Space Group: P 2 2 21
R_factor 0.207 R_Free 0.254
crystal
cell
length a length b length c angle alpha angle beta angle gamma
56.639 58.100 331.817 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand 8CS enzyme
Gene
Ontology
ChainFunctionProcessComponent
H, A, K, E


J, D, G, B


Primary referenceCrystal structure of a molybdopterin synthase-precursor Z complex: insight into its sulfur transfer mechanism and its role in molybdenum cofactor deficiency., Daniels JN, Wuebbens MM, Rajagopalan KV, Schindelin H, Biochemistry. 2008 Jan 15;47(2):615-26. Epub 2007 Dec 20. PMID:18092812
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (309 Kb) [Save to disk]
  • Biological Unit Coordinates (2qie.pdb1.gz) 150 Kb
  • Biological Unit Coordinates (2qie.pdb2.gz) 147 Kb
  • LPC: Ligand-Protein Contacts for 2QIE
  • CSU: Contacts of Structural Units for 2QIE
  • Likely Quarternary Molecular Structure file(s) for 2QIE
  • Structure Factors (341 Kb)
  • Retrieve 2QIE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2QIE from S2C, [Save to disk]
  • Re-refined 2qie structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2QIE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2QIE
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2QIE, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2qie_E] [2qie_H] [2qie_G] [2qie_A] [2qie_K] [2qie_B] [2qie_D] [2qie] [2qie_J]
  • SWISS-PROT database: [Q7A441] [P65401]
  • Domain organization of [MOAD_STAAN] [MOAE_STAAN] by SWISSPFAM
  • Other resources with information on 2QIE
  • Community annotation for 2QIE at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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