2QMQ Crystal structure of a n-myc downstream regulated 2 protein (ndrg2, syld, ndr2, ai182517, au040374) from mus musculus at 1.70 A resolution date
authors JCSG, Joint.Center.for.Structural.Genomics.
compound source
symmetry
R_factor
R_Free 0.183
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.70
ligand 2PE, BEZ, MG enzyme
note 2QMQ is a representative structure
Primary referenceCrystal structure of human NDRG2 protein provides insight into its role as a tumor suppressor., Hwang J, Kim Y, Kang HB, Jaroszewski L, Deacon A, Lee H, Choi WC, Kim KJ, Kim CH, Kang BS, Lee JO, Oh TK, Kim JW, Wilson IA, Kim MH, J Biol Chem. 2011 Jan 18. PMID:21247902
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (57 Kb) [Save to disk]
  • Biological Unit Coordinates (2qmq.pdb1.gz) 51 Kb
  • LPC: Ligand-Protein Contacts for 2QMQ
  • CSU: Contacts of Structural Units for 2QMQ
  • Likely Quarternary Molecular Structure file(s) for 2QMQ
  • Structure Factors (1924 Kb)
  • Retrieve 2QMQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2QMQ from S2C, [Save to disk]
  • Re-refined 2qmq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2QMQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2QMQ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2QMQ, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2qmq_A] [2qmq]
  • SWISS-PROT database: [Q9QYG0]
  • Domain organization of [NDRG2_MOUSE] by SWISSPFAM
    • Other resources with information on 2QMQ
  • Community annotation for 2QMQ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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