2QSF	Dna Binding Protein	date	Jul 31, 2007
title	Crystal Structure Of The Rad4-Rad23 Complex
authors	J.H.Min, N.P.Pavletich
compound		source
Molecule: Dna Repair Protein Rad4 Chain: A Synonym: Rad4 Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 Gene: Rad4 Expression_system: Trichoplusia Ni Expression_system_common: Cabbage Looper Expression_system_taxid: 7111 Expression_system_cell_line: Hi5 Expression_system_organ: Eggs Expression_system_vector_type: Baculovirus Expression_system_vector: Pfastbac Dual
Molecule: Uv Excision Repair Protein Rad23 Chain: X Synonym: Rad23 Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 Gene: Rad23 Expression_system: Trichoplusia Ni Expression_system_common: Cabbage Looper Expression_system_taxid: 7111 Expression_system_cell_line: Hi5 Expression_system_organ: Eggs Expression_system_vector_type: Baculovirus Expression_system_vector: Pfastbac Dual
symmetry	Space Group: C 1 2 1	R_factor 0.226 R_Free 0.245
crystal cell	length a length b length c angle alpha angle beta angle gamma 83.167 115.711 113.947 90.00 105.70 90.00
method	X-Ray Diffraction	resolution	2.35 Å
Gene Ontology	Chain Function Process Component A X
Primary reference	Recognition of DNA damage by the Rad4 nucleotide excision repair protein., Min JH, Pavletich NP, Nature. 2007 Sep 19;. PMID:17882165

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (106 Kb) [Save to disk] Biological Unit Coordinates (2qsf.pdb1.gz) 101 Kb CSU: Contacts of Structural Units for 2QSF Likely Quarternary Molecular Structure file(s) for 2QSF Structure Factors (625 Kb) Retrieve 2QSF in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2QSF from S2C, [Save to disk] Re-refined 2qsf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2QSF in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2QSF

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2QSF, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2qsf_A] [2qsf_X] [2qsf] SWISS-PROT database: [P32628] [P14736] Domain organization of [RAD23_YEAST] [RAD4_YEAST] by SWISSPFAM Domains found in 2QSF: [BHD_1] [BHD_2] [BHD_3] [STI1] [TGc] [UBA ] by SMART

Other resources with information on 2QSF

Community annotation for 2QSF at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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