2QVS Transferase Transferase Regulator date Aug 08, 2007
title Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent P Kinase
authors J.Wu, S.H.J.Brown, S.Von Daake, S.S.Taylor
compound source
Molecule: Camp-Dependent Protein Kinase, Alpha-Catalytic Su
Chain: E
Synonym: Pka C-Alpha
Ec: 2.7.11.11
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Gene: Prkaca, Pkaca
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Prset

Molecule: Camp-Dependent Protein Kinase Type II-Alpha Regul Subunit;
Chain: B
Engineered: Yes

Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Gene: Prkar2a
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Prset
symmetry Space Group: P 21 21 21
R_factor 0.212 R_Free 0.251
crystal
cell
length a length b length c angle alpha angle beta angle gamma
87.900 92.900 118.000 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand SEP, TPO enzyme Transferase E.C.2.7.11.11 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
B


E


Primary referencePKA type IIalpha holoenzyme reveals a combinatorial strategy for isoform diversity., Wu J, Brown SH, von Daake S, Taylor SS, Science. 2007 Oct 12;318(5848):274-9. PMID:17932298
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (106 Kb) [Save to disk]
  • Biological Unit Coordinates (2qvs.pdb1.gz) 101 Kb
  • LPC: Ligand-Protein Contacts for 2QVS
  • CSU: Contacts of Structural Units for 2QVS
  • Likely Quarternary Molecular Structure file(s) for 2QVS
  • Structure Factors (253 Kb)
  • Retrieve 2QVS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2QVS from S2C, [Save to disk]
  • Re-refined 2qvs structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2QVS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2QVS
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2QVS, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2qvs] [2qvs_B] [2qvs_E]
  • SWISS-PROT database: [P12367] [P05132]
  • Domain organization of [KAP2_MOUSE] [KAPCA_MOUSE] by SWISSPFAM
  • Domains found in 2QVS: [S_TK_X] [S_TKc] [cNMP ] by SMART
  • Other resources with information on 2QVS
  • Community annotation for 2QVS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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