2QXI Hydrolase date Aug 11, 2007
title High Resolution Structure Of Human Kallikrein 7 In Complex W Ala-Ala-Pro-Phe-Chloromethylketone
authors M.Debela, P.Hess, V.Magdolen, N.M.Schechter, W.Bode, P.Goettig
compound source
Molecule: Kallikrein-7
Chain: A
Synonym: Hk7, Stratum Corneum Chymotryptic Enzyme, Hscce, S Protease 6;
Ec: 3.4.21.117
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Klk7, Prss6, Scce
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_strain: Sf9
Expression_system_vector_type: Baculovirus
symmetry Space Group: P 1 21 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
38.254 56.953 45.533 90.00 101.37 90.00
method X-Ray Diffractionresolution 1.00 Å
ligand K7J enzyme Hydrolase E.C.3.4.21.117 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceChymotryptic specificity determinants in the 1.0 A structure of the zinc-inhibited human tissue kallikrein 7., Debela M, Hess P, Magdolen V, Schechter NM, Steiner T, Huber R, Bode W, Goettig P, Proc Natl Acad Sci U S A. 2007 Oct 9;104(41):16086-91. Epub 2007 Oct 1. PMID:17909180
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (88 Kb) [Save to disk]
  • Biological Unit Coordinates (2qxi.pdb1.gz) 84 Kb
  • LPC: Ligand-Protein Contacts for 2QXI
  • CSU: Contacts of Structural Units for 2QXI
  • Likely Quarternary Molecular Structure file(s) for 2QXI
  • Structure Factors (1000 Kb)
  • Retrieve 2QXI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2QXI from S2C, [Save to disk]
  • Re-refined 2qxi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2QXI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2QXI
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2QXI, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2qxi] [2qxi_A]
  • SWISS-PROT database: [P49862]
  • Domain organization of [KLK7_HUMAN] by SWISSPFAM
  • Domain found in 2QXI: [Tryp_SPc ] by SMART
  • Other resources with information on 2QXI
  • Community annotation for 2QXI at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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