2R6W Transcription date Sep 06, 2007
title Estrogen Receptor Alpha Ligand-Binding Domain Complexed To A
authors Y.Wang
compound source
Molecule: Estrogen Receptor
Chain: A, B
Fragment: Ligand Binding Domain, Unp Residues 304-551
Synonym: Er, Estradiol Receptor, Er-Alpha
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Esr1, Esr, Nr3a1
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
symmetry Space Group: C 2 2 21
R_factor 0.208 R_Free 0.257
crystal
cell
length a length b length c angle alpha angle beta angle gamma
56.470 102.761 172.952 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand LLB enzyme
Primary referencePrediction of the tissue-specificity of selective estrogen receptor modulators by using a single biochemical method., Dai SY, Chalmers MJ, Bruning J, Bramlett KS, Osborne HE, Montrose-Rafizadeh C, Barr RJ, Wang Y, Wang M, Burris TP, Dodge JA, Griffin PR, Proc Natl Acad Sci U S A. 2008 May 20;105(20):7171-6. Epub 2008 May 12. PMID:18474858
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (81 Kb) [Save to disk]
  • Biological Unit Coordinates (2r6w.pdb1.gz) 76 Kb
  • LPC: Ligand-Protein Contacts for 2R6W
  • CSU: Contacts of Structural Units for 2R6W
  • Likely Quarternary Molecular Structure file(s) for 2R6W
  • Structure Factors (271 Kb)
  • Retrieve 2R6W in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2R6W from S2C, [Save to disk]
  • Re-refined 2r6w structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2R6W in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2R6W
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2R6W, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2r6w] [2r6w_A] [2r6w_B]
  • SWISS-PROT database: [P03372]
  • Domain organization of [ESR1_HUMAN] by SWISSPFAM
  • Domain found in 2R6W: [HOLI ] by SMART
  • Other resources with information on 2R6W
  • Community annotation for 2R6W at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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