2REY Gene Regulation date Sep 27, 2007
title Crystal Structure Of The Pdz Domain Of Human Dishevelled 2 ( To Drosophila Dsh)
authors E.Papagrigoriou, C.Gileadi, J.Elkins, C.Cooper, E.Ugochukwu, A.Tu A.C.W.Pike, O.Gileadi, F.Von Delft, M.Sundstrom, C.H.Arrowsmith J.Weigelt, A.M.Edwards, D.Doyle, Structural Genomics Consortiu
compound source
Molecule: Segment Polarity Protein Dishevelled Homolog Dvl-
Chain: A
Fragment: Pdz Domain: Residues 261-355
Synonym: Dishevelled-2, Dsh Homolog 2
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Dvl2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)-R3-Rosetta
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pnic28-Bsa4
symmetry Space Group: P 61 2 2
R_factor 0.211 R_Free 0.240
crystal
cell
length a length b length c angle alpha angle beta angle gamma
69.644 69.644 57.540 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.55 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (23 Kb) [Save to disk]
  • Biological Unit Coordinates (2rey.pdb1.gz) 30 Kb
  • CSU: Contacts of Structural Units for 2REY
  • Likely Quarternary Molecular Structure file(s) for 2REY
  • Structure Factors (171 Kb)
  • Retrieve 2REY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2REY from S2C, [Save to disk]
  • Re-refined 2rey structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2REY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2REY
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2REY, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2rey] [2rey_A]
  • SWISS-PROT database: [O14641]
  • Domain organization of [DVL2_HUMAN] by SWISSPFAM
  • Domain found in 2REY: [PDZ ] by SMART
  • Other resources with information on 2REY
  • Community annotation for 2REY at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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