2RG5	Transferase	date	Oct 02, 2007
title	Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase Inhibitor 11b
authors	J.S.Sack
compound		source
Molecule: Mitogen-Activated Protein Kinase 14 Chain: A Synonym: Mitogen-Activated Protein Kinase P38 Alpha; Map Ki Alpha; Cytokine Suppressive Anti-Inflammatory Drug-Binding Csaid-Binding Protein; Csbp; Max-Interacting Protein 2; Map Mxi2; Sapk2a; Ec: 2.7.11.24 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Mapk14, Csbp, Csbp1, Csbp2, Cspb1, Mxi2 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_cell_line: Bl21 De3 Expression_system_vector_type: Plasmid
symmetry	Space Group: P 21 21 21	R_factor 0.237 R_Free 0.305
crystal cell	length a length b length c angle alpha angle beta angle gamma 67.721 71.866 79.529 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.40 Å
ligand	279 BindingDB	enzyme	Transferase E.C.2.7.11.24 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Design, Synthesis, and Anti-inflammatory Properties of Orally Active 4-(Phenylamino)-pyrrolo[2,1-f][1,2,4]triazine p38alpha Mitogen-Activated Protein Kinase Inhibitors., Hynes J Jr, Dyckman AJ, Lin S, Wrobleski ST, Wu H, Gillooly KM, Kanner SB, Lonial H, Loo D, McIntyre KW, Pitt S, Shen DR, Shuster DJ, Yang X, Zhang R, Behnia K, Zhang H, Marathe PH, Doweyko AM, Tokarski JS, Sack JS, Pokross M, Kiefer SE, Newitt JA, Barrish JC, Dodd J, Schieven GL, Leftheris K, J Med Chem. 2008 Jan 10;51(1):4-16. Epub 2007 Dec 12. PMID:18072718

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (61 Kb) [Save to disk] Biological Unit Coordinates (2rg5.pdb1.gz) 56 Kb LPC: Ligand-Protein Contacts for 2RG5 CSU: Contacts of Structural Units for 2RG5 Likely Quarternary Molecular Structure file(s) for 2RG5 Structure Factors (107 Kb) Retrieve 2RG5 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2RG5 from S2C, [Save to disk] Re-refined 2rg5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2RG5 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2RG5

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2RG5, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2rg5_A] [2rg5] SWISS-PROT database: [Q16539] Domain organization of [MK14_HUMAN] by SWISSPFAM Domain found in 2RG5: [S_TKc ] by SMART

Other resources with information on 2RG5

Community annotation for 2RG5 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---