2RGP	Transferase	date	Oct 04, 2007
title	Structure Of Egfr In Complex With Hydrazone, A Potent Dual I
authors	M.C.Abad
compound		source
Molecule: Epidermal Growth Factor Receptor Chain: A Fragment: Residues 702-1016 Synonym: Receptor Tyrosine-Protein Kinase Erbb-1 Ec: 2.7.10.1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Strain: Human Strains Undefined Gene: Egfr, Erbb1 Expression_system: Spodoptera Frugiperda Expression_system_strain: Sf9 Expression_system_vector_type: Baculovirus Expression_system_plasmid: Modified Pdest8
symmetry	Space Group: P 21 21 21	R_factor 0.228 R_Free 0.268
crystal cell	length a length b length c angle alpha angle beta angle gamma 45.850 68.030 103.860 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	HYZ, PO4	enzyme	Transferase E.C.2.7.10.1 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	4-Amino-6-arylamino-pyrimidine-5-carbaldehyde hydrazones as potent ErbB-2/EGFR dual kinase inhibitors., Xu G, Abad MC, Connolly PJ, Neeper MP, Struble GT, Springer BA, Emanuel SL, Pandey N, Gruninger RH, Adams M, Moreno-Mazza S, Fuentes-Pesquera AR, Middleton SA, Bioorg Med Chem Lett. 2008 Aug 15;18(16):4615-9. Epub 2008 Jul 10. PMID:18653333

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (54 Kb) [Save to disk] Biological Unit Coordinates (2rgp.pdb1.gz) 50 Kb LPC: Ligand-Protein Contacts for 2RGP CSU: Contacts of Structural Units for 2RGP Likely Quarternary Molecular Structure file(s) for 2RGP Structure Factors (205 Kb) Retrieve 2RGP in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2RGP from S2C, [Save to disk] Re-refined 2rgp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2RGP in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2RGP

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2RGP, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2rgp] [2rgp_A] SWISS-PROT database: [P00533] Domain organization of [EGFR_HUMAN] by SWISSPFAM Domain found in 2RGP: [TyrKc ] by SMART

Other resources with information on 2RGP

Community annotation for 2RGP at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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