2RHU	Transcription	date	Oct 09, 2007
title	Crystal Structure Of The 3-Mbt Repeats From Human L3mbtl1 Bo Dimethyl-Lysine And In Chimera With Histone H3.3(28-34)
authors	H.Li, D.J.Patel
compound		source
Molecule: Lethal(3)Malignant Brain Tumor-Like Protein Chain: A Fragment: Repeates Mbt-1, Mbt-2, Mbt-3; Residues 206-519 Synonym: L3, Mbt-Like, L3, Mbt Protein Homolog, H-L3, Mbt P L3, Mbt, L3mbtl1; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: L3mbtl, Kiaa0681, L3mbt Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Rosetta2 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgex6p
symmetry	Space Group: P 21 21 2	R_factor 0.194 R_Free 0.215
crystal cell	length a length b length c angle alpha angle beta angle gamma 85.166 94.023 59.187 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.90 Å
ligand	CML, MLY, PEG, PG4, SO4	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Structural Basis for Lower Lysine Methylation State-Specific Readout by MBT Repeats of L3MBTL1 and an Engineered PHD Finger., Li H, Fischle W, Wang W, Duncan EM, Liang L, Murakami-Ishibe S, Allis CD, Patel DJ, Mol Cell. 2007 Nov 30;28(4):677-91. PMID:18042461

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (68 Kb) [Save to disk] Biological Unit Coordinates (2rhu.pdb1.gz) 63 Kb LPC: Ligand-Protein Contacts for 2RHU CSU: Contacts of Structural Units for 2RHU Likely Quarternary Molecular Structure file(s) for 2RHU Structure Factors (473 Kb) Retrieve 2RHU in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2RHU from S2C, [Save to disk] Re-refined 2rhu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2RHU in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2RHU

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2RHU, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2rhu_A] [2rhu] SWISS-PROT database: [Q9Y468] Domain organization of [LMBL1_HUMAN] by SWISSPFAM Domain found in 2RHU: [MBT ] by SMART

Other resources with information on 2RHU

Community annotation for 2RHU at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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