2RI7	Transcription Nuclear Protein	date	Oct 10, 2007
title	Crystal Structure Of Phd Finger-Linker-Bromodomain Y17e Muta Human Bptf In The H3(1-9)K4me2 Bound State
authors	H.Li, D.J.Patel
compound		source
Molecule: Nucleosome-Remodeling Factor Subunit Bptf Chain: A Fragment: Phd-Type 2 Domain And Bromo Domain; Residues 2726 Synonym: Bromodomain And Phd Finger- Containing Transcripti Fetal Alzheimer Antigen, Fetal Alz- 50 Clone 1 Protein; Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Bptf, Fac1, Falz Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Rosetta2 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgex6p
Molecule: Histone H3.1 Chain: P Fragment: N-Terminal Tail Residues 2-10 Engineered: Yes		Synthetic: Yes Other_details: This Sequence Occurs Naturally In Humans
symmetry	Space Group: P 21 21 21	R_factor 0.189 R_Free 0.192
crystal cell	length a length b length c angle alpha angle beta angle gamma 38.249 64.381 85.558 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.45 Å
ligand	GOL, IPA, MLY, ZN	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Structural Basis for Lower Lysine Methylation State-Specific Readout by MBT Repeats of L3MBTL1 and an Engineered PHD Finger., Li H, Fischle W, Wang W, Duncan EM, Liang L, Murakami-Ishibe S, Allis CD, Patel DJ, Mol Cell. 2007 Nov 30;28(4):677-91. PMID:18042461

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (42 Kb) [Save to disk] Biological Unit Coordinates (2ri7.pdb1.gz) 37 Kb LPC: Ligand-Protein Contacts for 2RI7 CSU: Contacts of Structural Units for 2RI7 Likely Quarternary Molecular Structure file(s) for 2RI7 Structure Factors (295 Kb) Retrieve 2RI7 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2RI7 from S2C, [Save to disk] Re-refined 2ri7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2RI7 in 3D

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Visual 3D analysis of 2RI7

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2RI7, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2ri7] [2ri7_P] [2ri7_A] SWISS-PROT database: [Q12830] [P68431] Domain organization of [BPTF_HUMAN] [H31_HUMAN] by SWISSPFAM Domains found in 2RI7: [BROMO] [PHD ] by SMART

Other resources with information on 2RI7

Community annotation for 2RI7 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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