2RJY Structural Protein date Oct 16, 2007
title Crystal Structure Of Villin Headpiece, P21 21 21 Space Group
authors J.Meng, C.J.Mcknight
compound source
Molecule: Villin-1
Chain: A
Fragment: Villin Headpiece
Engineered: Yes
 Organism_scientific: Gallus Gallus
Organism_common: Chicken
Gene: Vil1, Vil
Expression_system: Escherichia Coli
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Pet24a
Expression_system_plasmid: Pvhp
symmetry Space Group: P 21 21 21
R_factor 0.209 R_Free 0.233
crystal
cell
length a length b length c angle alpha angle beta angle gamma
31.212 37.780 53.147 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.40 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of a pH-stabilized mutant of villin headpiece., Meng J, McKnight CJ, Biochemistry. 2008 Apr 22;47(16):4644-50. Epub 2008 Mar 28. PMID:18370407
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (16 Kb) [Save to disk]
  • Biological Unit Coordinates (2rjy.pdb1.gz) 12 Kb
  • CSU: Contacts of Structural Units for 2RJY
  • Likely Quarternary Molecular Structure file(s) for 2RJY
  • Structure Factors (87 Kb)
  • Retrieve 2RJY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2RJY from S2C, [Save to disk]
  • Re-refined 2rjy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2RJY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2RJY
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2RJY, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2rjy] [2rjy_A]
  • SWISS-PROT database: [P02640]
  • Domain organization of [VILI_CHICK] by SWISSPFAM
  • Domain found in 2RJY: [VHP ] by SMART
    • Other resources with information on 2RJY
  • Community annotation for 2RJY at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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