2RLG Antimicrobial Protein date Jul 07, 2007
title Nmr Structure Of The Antimicrobial Peptide Rp-1 Bound To Sds
authors S.Bourbigot, E.Dodd, C.Horwood, V.Booth
compound source
Molecule: Antimicrobial Peptide Rp-1
Chain: A
Engineered: Yes
 Synthetic: Yes
Other_details: Solid Phase Synthesis Employing Fmoc (O- Fluorenylmethyl-Oxycarbonyl) Chemistry
methodSolution NMR
Primary referenceAntimicrobial peptide RP-1 structure and interactions with anionic versus zwitterionic micelles., Bourbigot S, Dodd E, Horwood C, Cumby N, Fardy L, Welch WH, Ramjan Z, Sharma S, Waring AJ, Yeaman MR, Booth V, Biopolymers. 2009 Jan;91(1):1-13. PMID:18712851
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (48 Kb) [Save to disk]
  • Biological Unit Coordinates (2rlg.pdb1.gz) 6 Kb
  • CSU: Contacts of Structural Units for 2RLG
  • Original NMR restraints for 2RLG from PDB
  • Retrieve 2RLG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2RLG from S2C, [Save to disk]
    • View 2RLG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2RLG
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2RLG, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2rlg_A] [2rlg]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 2RLG
  • Community annotation for 2RLG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science