2RMB	Isomerase Immunosuppressant	date	Jan 07, 1994
title	Crystal Structures Of Cyclophilin A Complexed With Cyclospor N-Methyl-4-[(E)-2-Butenyl]-4,4-Dimethylthreonine Cyclospori
authors	H.Ke, D.Mayrose
compound		source
Molecule: Peptidyl-Prolyl Cis-Trans Isomerase Chain: A, C, E, G, I, K, M, O, Q, S Synonym: Ppiase, Rotamase, Cyclophilin A Ec: 5.2.1.8 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_taxid: 9606 Gene: Cyclophilin A
Molecule: Cyclosporin A Chain: B, D, F, H, J, L, N, P, R, T Synonym: Ciclosporin, Ciclosporine Engineered: Yes Other_details: 3-Hydroxy-4,4-Dimethyl-2-(Methylamino)-6- Oc Acid At Position 5		Synthetic: Yes Organism_scientific: Tolypocladium Inflatum Organism_taxid: 29910
symmetry	Space Group: P 1 21 1	R_factor 0.184 R_Free NULL
crystal cell	length a length b length c angle alpha angle beta angle gamma 72.600 160.600 95.300 90.00 90.90 90.00
method	X-Ray Diffraction	resolution	2.10 Å
ligand	ABA, DAL, DMT, MLE, MVA, SAR	enzyme	Isomerase E.C.5.2.1.8 BRENDA
related structures	by homologous chain: 2RMA, 4CYH
Gene Ontology	Chain Function Process Component S, A, O, K, E, Q, M, C, I, G
Primary reference	Crystal structures of cyclophilin A complexed with cyclosporin A and N-methyl-4-[(E)-2-butenyl]-4,4-dimethylthreonine cyclosporin A., Ke H, Mayrose D, Belshaw PJ, Alberg DG, Schreiber SL, Chang ZY, Etzkorn FA, Ho S, Walsh CT, Structure 1994 Jan 15;2(1):33-44. PMID:8075981

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (376 Kb) [Save to disk] Biological Unit Coordinates (2rmb.pdb1.gz) 365 Kb LPC: Ligand-Protein Contacts for 2RMB CSU: Contacts of Structural Units for 2RMB Likely Quarternary Molecular Structure file(s) for 2RMB Retrieve 2RMB in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2RMB from S2C, [Save to disk]

View 2RMB in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2RMB

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2RMB, from MSDmotif at EBI Genome occurence of 2RMB's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d2rmba_, region A [Jmol] [rasmolscript] [script source]     - Domain d2rmbc_, region C [Jmol] [rasmolscript] [script source]     - Domain d2rmbe_, region E [Jmol] [rasmolscript] [script source]     - Domain d2rmbg_, region G [Jmol] [rasmolscript] [script source]     - Domain d2rmbi_, region I [Jmol] [rasmolscript] [script source]     - Domain d2rmbk_, region K [Jmol] [rasmolscript] [script source]     - Domain d2rmbm_, region M [Jmol] [rasmolscript] [script source]     - Domain d2rmbo_, region O [Jmol] [rasmolscript] [script source]     - Domain d2rmbq_, region Q [Jmol] [rasmolscript] [script source]     - Domain d2rmbs_, region S [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2rmb_N] [2rmb_C] [2rmb_F] [2rmb] [2rmb_O] [2rmb_I] [2rmb_M] [2rmb_K] [2rmb_T] [2rmb_A] [2rmb_P] [2rmb_Q] [2rmb_D] [2rmb_E] [2rmb_H] [2rmb_R] [2rmb_G] [2rmb_S] [2rmb_B] [2rmb_L] [2rmb_J] SWISS-PROT database: [P62937] Domain organization of [PPIA_HUMAN] by SWISSPFAM

Other resources with information on 2RMB

Community annotation for 2RMB at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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