2RNZ Transferase date Mar 01, 2008
title Solution Structure Of The Presumed Chromodomain Of The Yeast Acetyltransferase, Esa1
authors H.Shimojo, N.Sano, Y.Moriwaki, M.Okuda, M.Horikoshi, Y.Nishimura
compound source
Molecule: Histone Acetyltransferase Esa1
Chain: A
Fragment: Residues 17-89
Ec: 2.3.1.48
Engineered: Yes
 Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b
methodSolution NMR
ligand
enzyme Transferase E.C.2.3.1.48 BRENDA
note 2RNZ is a representative structure
Primary referenceNovel structural and functional mode of a knot essential for RNA binding activity of the Esa1 presumed chromodomain., Shimojo H, Sano N, Moriwaki Y, Okuda M, Horikoshi M, Nishimura Y, J Mol Biol. 2008 May 16;378(5):987-1001. Epub 2008 Mar 19. PMID:18407291
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (520 Kb) [Save to disk]
  • Biological Unit Coordinates (2rnz.pdb1.gz) 26 Kb
  • CSU: Contacts of Structural Units for 2RNZ
  • Original NMR restraints for 2RNZ from PDB
  • Retrieve 2RNZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2RNZ from S2C, [Save to disk]
    • View 2RNZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2RNZ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2RNZ, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2rnz_A] [2rnz]
  • SWISS-PROT database: [Q08649]
  • Domain organization of [ESA1_YEAST] by SWISSPFAM
  • Domain found in 2RNZ: [CHROMO ] by SMART
    • Other resources with information on 2RNZ
  • Community annotation for 2RNZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science