2ROZ	Peptide Binding Protein	date	Apr 25, 2008
title	Structure Of The C-Terminal Pid Domain Of Fe65l1 Complexed W Cytoplasmic Tail Of App Reveals A Novel Peptide Binding Mod
authors	H.Li, S.Koshiba, N.Tochio, S.Watanabe, T.Harada, M.Inoue, T.Kigawa S.Yokoyama, Riken Structural Genomicsproteomics Initiative
compound		source
Molecule: Peptide From Amyloid Beta A4 Protein Chain: A Synonym: App-Derived_32-Mer_peptide Engineered: Yes		Synthetic: Yes Other_details: Chemical Synthesis
Molecule: Amyloid Beta A4 Precursor Protein-Binding Family 2; Chain: B Fragment: C-Terminal Pid Domain Synonym: Fe65l1 Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: Mouse Organism_taxid: 10090 Gene: Apbb2 Expression_system: Cell-Free Synthesis Other_details: E. Coli Cell-Free
method	Solution NMR
Gene Ontology	Chain Function Process Component A B
Primary reference	Structure of the C-terminal phosphotyrosine interaction domain of Fe65L1 complexed with the cytoplasmic tail of amyloid precursor protein reveals a novel peptide binding mode., Li H, Koshiba S, Hayashi F, Tochio N, Tomizawa T, Kasai T, Yabuki T, Motoda Y, Harada T, Watanabe S, Inoue M, Hayashizaki Y, Tanaka A, Kigawa T, Yokoyama S, J Biol Chem. 2008 Oct 3;283(40):27165-78. Epub 2008 Jul 23. PMID:18650440

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (849 Kb) [Save to disk] Biological Unit Coordinates (2roz.pdb1.gz) 42 Kb CSU: Contacts of Structural Units for 2ROZ Original NMR restraints for 2ROZ from PDB Retrieve 2ROZ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2ROZ from S2C, [Save to disk]

View 2ROZ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2ROZ

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2ROZ, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2roz] [2roz_B] [2roz_A] SWISS-PROT database: [P12023] [Q9DBR4] Domain organization of [A4_MOUSE] [APBB2_MOUSE] by SWISSPFAM Domain found in 2ROZ: [PTB ] by SMART

Other resources with information on 2ROZ

Community annotation for 2ROZ at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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