2RRM Cell Adhesion date Jan 06, 2011
title Interplay Between Phosphatidyl-Inositol-Phosphates And Claud Binding To The 1st Pdz Domain Of Zonula Occludens 1
authors H.Hiroaki, K.Satomura, N.Goda, Y.Umetsu, R.Taniguchi, T.Ikegami, M
compound source
Molecule: Tight Junction Protein Zo-1
Chain: A
Fragment: The First Pdz Domain, Unp Residues 18-110
Synonym: Tight Junction Protein 1, Zona Occludens Protein 1 Occludens Protein 1;
Engineered: Yes
 Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Vector
Expression_system_vector: Presat-Vector
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary reference(1)H, (13)C, and (15)N resonance assignment of the first PDZ domain of mouse ZO-1., Umetsu Y, Goda N, Taniguchi R, Satomura K, Ikegami T, Furuse M, Hiroaki H, Biomol NMR Assign. 2011 Mar 24. PMID:21431884
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (493 Kb) [Save to disk]
  • Biological Unit Coordinates (2rrm.pdb1.gz) 25 Kb
  • CSU: Contacts of Structural Units for 2RRM
  • Original NMR restraints for 2RRM from PDB
  • Retrieve 2RRM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2RRM from S2C, [Save to disk]
    • View 2RRM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2RRM
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2RRM, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2rrm_A] [2rrm]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2RRM: [PDZ ] by SMART
    • Other resources with information on 2RRM
  • Community annotation for 2RRM at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science