2STA Hydrolase Hydrolase Inhibitor date Dec 10, 1998
title Anionic Salmon Trypsin In Complex With Squash Seed Inhibitor (Cucurbita Maxima Trypsin Inhibitor I)
authors R.Helland, G.I.Berglund, J.Otlewski, W.Apostoluk, O.A.Andersen, N.P.Willassen, A.O.Smalas
compound source
Molecule: Protein (Trypsin)
Chain: E
Ec: 3.4.21.4
Organism_scientific: Salmo Salar
Organism_common: Atlantic Salmon
Organism_taxid: 8030
Tissue: Pancreatic

Molecule: Protein (Trypsin Inhibitor)
Chain: I

Organism_scientific: Cucurbita Maxima
Organism_common: Winter Squash
Organism_taxid: 3661
Organ: Squash Seeds
symmetry Space Group: P 21 21 21
R_factor 0.193 R_Free 0.233
crystal
cell
length a length b length c angle alpha angle beta angle gamma
62.300 63.700 82.300 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand CA enzyme Hydrolase E.C.3.4.21.4 BRENDA
related structures by homologous chain: 1SLU, 3BTF
Gene
Ontology
ChainFunctionProcessComponent
E


I
  • endopeptidase inhibitor acti...
  • serine-type endopeptidase in...


  • Primary referenceHigh-resolution structures of three new trypsin-squash-inhibitor complexes: a detailed comparison with other trypsins and their complexes., Helland R, Berglund GI, Otlewski J, Apostoluk W, Andersen OA, Willassen NP, Smalas AO, Acta Crystallogr D Biol Crystallogr 1999 Jan;55 ( Pt 1):139-48. PMID:10089404
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (45 Kb) [Save to disk]
  • Biological Unit Coordinates (2sta.pdb1.gz) 41 Kb
  • LPC: Ligand-Protein Contacts for 2STA
  • CSU: Contacts of Structural Units for 2STA
  • Likely Quarternary Molecular Structure file(s) for 2STA
  • Structure Factors (220 Kb)
  • Retrieve 2STA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2STA from S2C, [Save to disk]
  • Re-refined 2sta structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2STA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2STA
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2STA, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d2stae_, region E [Jmol] [rasmolscript] [script source]
        - Domain d2stai_, region I [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2sta] [2sta_I] [2sta_E]
  • SWISS-PROT database: [P01074] [P35031]
  • Domain organization of [ITR1_CUCMA] [TRY1_SALSA] by SWISSPFAM
  • Domains found in 2STA: [PTI] [Tryp_SPc ] by SMART
  • Other resources with information on 2STA
  • Community annotation for 2STA at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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