2UWI Receptor date Mar 22, 2007
title Structure Of Crme, A Poxvirus Tnf Receptor
authors S.C.Graham, M.W.Bahar, N.G.Abrescia, G.L.Smith, D.I.Stuart, J.M.G
compound source
Molecule: Crme Protein
Chain: A, B
Fragment: Cysteine-Rich Domains 1-3, Residues 22-153
Synonym: Cytokine Response Modifier E
Engineered: Yes
Organism_scientific: Vaccinia Virus
Organism_taxid: 10252
Strain: Lister
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_variant: Rosetta Plyss
Expression_system_plasmid: Pdest14crme
symmetry Space Group: P 21 21 21
R_factor 0.210 R_Free 0.247
crystal
cell
length a length b length c angle alpha angle beta angle gamma
41.380 56.490 122.530 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
note 2UWI is a representative structure
Primary referenceStructure of CrmE, a Virus-encoded Tumour Necrosis Factor Receptor., Graham SC, Bahar MW, Abrescia NG, Smith GL, Stuart DI, Grimes JM, J Mol Biol. 2007 Sep 21;372(3):660-71. Epub 2007 Jul 3. PMID:17681535
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (47 Kb) [Save to disk]
  • Biological Unit Coordinates (2uwi.pdb1.gz) 22 Kb
  • Biological Unit Coordinates (2uwi.pdb2.gz) 22 Kb
  • CSU: Contacts of Structural Units for 2UWI
  • Likely Quarternary Molecular Structure file(s) for 2UWI
  • Structure Factors (147 Kb)
  • Retrieve 2UWI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2UWI from S2C, [Save to disk]
  • Re-refined 2uwi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2UWI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2UWI
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2UWI, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2uwi_A] [2uwi_B] [2uwi]
  • SWISS-PROT database: [Q8UYL3]
  • Domain organization of [Q8UYL3_9POXV] by SWISSPFAM
  • Domain found in 2UWI: [TNFR ] by SMART
  • Other resources with information on 2UWI
  • Community annotation for 2UWI at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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