2UWV Photosynthesis date Mar 23, 2007
title X-Ray High Resolution Structure Of The Photosynthetic Reacti From Rb. Sphaeroides At Ph 6.5 In The Charge-Separated Stat Dataset
authors J.Koepke, R.Diehm, G.Fritzsch
compound source
Molecule: Reaction Center Protein H Chain
Chain: H
Synonym: Photosynthetic Reaction Center H Subunit
Other_details: Ph 6.5 Charge-Separated State
Organism_scientific: Rhodobacter Sphaeroides
Organism_taxid: 1063

Molecule: Reaction Center Protein L Chain
Chain: L
Synonym: Photosynthetic Reaction Center L Subunit
Other_details: Ph 6.5 Charge-Separated State

Organism_scientific: Rhodobacter Sphaeroides
Organism_taxid: 1063

Molecule: Reaction Center Protein M Chain
Chain: M
Synonym: Photosynthetic Reaction Center M Subunit
Other_details: Ph 6.5 Charge-Separated State

Organism_scientific: Rhodobacter Sphaeroides
Organism_taxid: 1063
symmetry Space Group: P 31 2 1
R_factor 0.225 R_Free 0.247
crystal
cell
length a length b length c angle alpha angle beta angle gamma
139.662 139.662 184.436 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.13 Å
ligand BCL, BPH, FE, GOL, HTO, LDA, PO4, SPO, U10, UQ2 enzyme
Gene
Ontology
ChainFunctionProcessComponent
H
  • electron transporter, transf...


  • L


    M


    Primary referencepH Modulates the Quinone Position in the Photosynthetic Reaction Center from Rhodobacter sphaeroides in the Neutral and Charge Separated States., Koepke J, Krammer EM, Klingen AR, Sebban P, Ullmann GM, Fritzsch G, J Mol Biol. 2007 Aug 10;371(2):396-409. Epub 2007 May 10. PMID:17570397
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (163 Kb) [Save to disk]
  • Biological Unit Coordinates (2uwv.pdb1.gz) 151 Kb
  • LPC: Ligand-Protein Contacts for 2UWV
  • CSU: Contacts of Structural Units for 2UWV
  • Likely Quarternary Molecular Structure file(s) for 2UWV
  • Structure Factors (735 Kb)
  • Retrieve 2UWV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2UWV from S2C, [Save to disk]
  • Re-refined 2uwv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2UWV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2UWV
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2UWV, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2uwv] [2uwv_M] [2uwv_L] [2uwv_H]
  • SWISS-PROT database: [P0C0Y7] [P0C0Y8] [P0C0Y9]
  • Belongs to the photosynthetic reaction center (prc) family according to TCDB.
  • Domain organization of [RCEH_RHOSH] [RCEL_RHOSH] [RCEM_RHOSH] by SWISSPFAM
  • Other resources with information on 2UWV
  • Community annotation for 2UWV at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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