2UYO Transferase date Apr 11, 2007
title Crystal Structure Of Ml2640c From Mycobacterium Leprae In An Crystal Form
authors M.Grana, A.Buschiazzo, A.Wehenkel, A.Haouz, I.Miras, W.Shepard, P.
compound source
Molecule: Hypothetical Protein Ml2640
Chain: A
Synonym: Methyltransferase
Engineered: Yes
Organism_scientific: Mycobacterium Leprae
Organism_taxid: 1769
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector: Pdest17
symmetry Space Group: P 65
R_factor 0.208 R_Free 0.234
crystal
cell
length a length b length c angle alpha angle beta angle gamma
75.725 75.725 105.811 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.70 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe crystal structure of M. leprae ML2640c defines a large family of putative S-adenosylmethionine-dependent methyltransferases in mycobacteria., Grana M, Haouz A, Buschiazzo A, Miras I, Wehenkel A, Bondet V, Shepard W, Schaeffer F, Cole ST, Alzari PM, Protein Sci. 2007 Sep;16(9):1896-904. Epub 2007 Jul 27. PMID:17660248
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (50 Kb) [Save to disk]
  • Biological Unit Coordinates (2uyo.pdb1.gz) 45 Kb
  • CSU: Contacts of Structural Units for 2UYO
  • Likely Quarternary Molecular Structure file(s) for 2UYO
  • Structure Factors (270 Kb)
  • Retrieve 2UYO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2UYO from S2C, [Save to disk]
  • Re-refined 2uyo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2UYO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2UYO
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2UYO, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2uyo_A] [2uyo]
  • SWISS-PROT database: [Q9CCZ4]
  • Domain organization of [Y2640_MYCLE] by SWISSPFAM
  • Other resources with information on 2UYO
  • Community annotation for 2UYO at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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