2UZB	Transferase	date	Apr 27, 2007
title	Crystal Structure Of Human Cdk2 Complexed With A Thiazolidin Inhibitor
authors	C.M.Richardson, P.Dokurno, J.B.Murray, A.E.Surgenor
compound		source
Molecule: Cell Division Protein Kinase 2 Chain: A, C Synonym: Cyclin Dependent Kinase 2, P33 Protein Kinase Ec: 2.7.1.37, 2.7.11.22 Engineered: Yes Other_details: Thr160 Phosphorylated		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 511693 Expression_system_strain: Bl21 Expression_system_vector: Pgex
Molecule: Cyclin-A2 Chain: B, D Fragment: Residues 175-432 Synonym: Cyclin A2, Cyclin-A Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 511693 Expression_system_strain: Bl21 Expression_system_vector: Pet41a
symmetry	Space Group: P 21 21 2	R_factor 0.201 R_Free 0.265
crystal cell	length a length b length c angle alpha angle beta angle gamma 151.466 163.697 73.188 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.70 Å
ligand	C75, TPO	enzyme	Transferase E.C.2.7.1.37 BRENDA
Gene Ontology	Chain Function Process Component A, C
Primary reference	Discovery of a potent CDK2 inhibitor with a novel binding mode, using virtual screening and initial, structure-guided lead scoping., Richardson CM, Nunns CL, Williamson DS, Parratt MJ, Dokurno P, Howes R, Borgognoni J, Drysdale MJ, Finch H, Hubbard RE, Jackson PS, Kierstan P, Lentzen G, Moore JD, Murray JB, Simmonite H, Surgenor AE, Torrance CJ, Bioorg Med Chem Lett. 2007 Jul 15;17(14):3880-5. Epub 2007 May 6. PMID:17570665

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (194 Kb) [Save to disk] Biological Unit Coordinates (2uzb.pdb1.gz) 94 Kb Biological Unit Coordinates (2uzb.pdb2.gz) 94 Kb LPC: Ligand-Protein Contacts for 2UZB CSU: Contacts of Structural Units for 2UZB Likely Quarternary Molecular Structure file(s) for 2UZB Structure Factors (360 Kb) Retrieve 2UZB in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2UZB from S2C, [Save to disk] Re-refined 2uzb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2UZB in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2UZB

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2UZB, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2uzb_B] [2uzb_C] [2uzb] [2uzb_A] [2uzb_D] SWISS-PROT database: [P20248] [P24941] Domain organization of [CCNA2_HUMAN] [CDK2_HUMAN] by SWISSPFAM Domains found in 2UZB: [CYCLIN] [Cyclin_C] [S_TKc ] by SMART

Other resources with information on 2UZB

Community annotation for 2UZB at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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