2UZO Transferase date Apr 30, 2007
title Crystal Structure Of Human Cdk2 Complexed With A Thiazolidin Inhibitor
authors C.M.Richardson, P.Dokurno, J.B.Murray, A.E.Surgenor
compound source
Molecule: Cell Division Protein Kinase 2
Chain: A
Synonym: P33 Protein Kinase, Cyclin Dependent Kinase 2
Ec: 2.7.11.22, 2.7.1.37
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
Expression_system_strain: Sf21
Expression_system_vector_type: Baculovirus
symmetry Space Group: P 21 21 21
R_factor 0.212 R_Free 0.291
crystal
cell
length a length b length c angle alpha angle beta angle gamma
53.422 72.256 72.330 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.30 Å
ligand C62 enzyme Transferase E.C.2.7.11.22 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceDiscovery of a potent CDK2 inhibitor with a novel binding mode, using virtual screening and initial, structure-guided lead scoping., Richardson CM, Nunns CL, Williamson DS, Parratt MJ, Dokurno P, Howes R, Borgognoni J, Drysdale MJ, Finch H, Hubbard RE, Jackson PS, Kierstan P, Lentzen G, Moore JD, Murray JB, Simmonite H, Surgenor AE, Torrance CJ, Bioorg Med Chem Lett. 2007 Jul 15;17(14):3880-5. Epub 2007 May 6. PMID:17570665
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (56 Kb) [Save to disk]
  • Biological Unit Coordinates (2uzo.pdb1.gz) 48 Kb
  • LPC: Ligand-Protein Contacts for 2UZO
  • CSU: Contacts of Structural Units for 2UZO
  • Likely Quarternary Molecular Structure file(s) for 2UZO
  • Structure Factors (94 Kb)
  • Retrieve 2UZO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2UZO from S2C, [Save to disk]
  • Re-refined 2uzo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2UZO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2UZO
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2UZO, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2uzo] [2uzo_A]
  • SWISS-PROT database: [P24941]
  • Domain organization of [CDK2_HUMAN] by SWISSPFAM
  • Domain found in 2UZO: [S_TKc ] by SMART
  • Other resources with information on 2UZO
  • Community annotation for 2UZO at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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