2UZU Transferase date May 01, 2007
title Pka Structures Of Indazole-Pyridine Series Of Akt Inhibitors
authors G.D.Zhu, V.B.Gandhi, J.Gong, S.Thomas, K.W.Woods, X.Song, T.Li, R.B.Diebold, Y.Luo, X.Liu, R.Guan, V.Klinghofer, E.F.Johnson, J.Bouska, A.Olson, K.C.Marsh, V.S.Stoll, M.Mamo, J.Polakowski, T.J.Campbell, T.D.Penning, Q.Li, S.H.Rosenberg, V.L.Giranda
compound source
Molecule: Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit;
Chain: E
Fragment: Residues 15-350
Synonym: Pka C-Alpha, Protein Kinase A
Ec: 2.7.11.11
Engineered: Yes
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Camp-Dependent Protein Kinase Inhibitor Alpha
Chain: I
Fragment: Residues 5-24
Synonym: Pki-Alpha
Engineered: Yes

Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.3183 R_Free 0.3707
crystal
cell
length a length b length c angle alpha angle beta angle gamma
72.755 74.748 80.049 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.4 Å
ligand L20 BindingDB enzyme Transferase E.C.2.7.11.11 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
E


I


Primary referenceSyntheses of potent, selective, and orally bioavailable indazole-pyridine series of protein kinase b/akt inhibitors with reduced hypotension., Zhu GD, Gandhi VB, Gong J, Thomas S, Woods KW, Song X, Li T, Diebold RB, Luo Y, Liu X, Guan R, Klinghofer V, Johnson EF, Bouska J, Olson A, Marsh KC, Stoll VS, Mamo M, Polakowski J, Campbell TJ, Martin RL, Gintant GA, Penning TD, Li Q, Rosenberg SH, Giranda VL, J Med Chem. 2007 Jun 28;50(13):2990-3003. Epub 2007 May 25. PMID:17523610
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (65 Kb) [Save to disk]
  • Biological Unit Coordinates (2uzu.pdb1.gz) 60 Kb
  • LPC: Ligand-Protein Contacts for 2UZU
  • CSU: Contacts of Structural Units for 2UZU
  • Likely Quarternary Molecular Structure file(s) for 2UZU
  • Retrieve 2UZU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2UZU from S2C, [Save to disk]
  • View 2UZU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2UZU
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2UZU, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2uzu_E] [2uzu_I] [2uzu]
  • SWISS-PROT database: [Q3SX13] [P00517]
  • Domain organization of [IPKA_BOVIN] [KAPCA_BOVIN] by SWISSPFAM
  • Domains found in 2UZU: [S_TK_X] [S_TKc ] by SMART
  • Other resources with information on 2UZU
  • Community annotation for 2UZU at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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