2UZX	Signaling Protein Receptor	date	May 02, 2007
title	Structure Of The Human Receptor Tyrosine Kinase Met In Compl The Listeria Monocytogenes Invasion Protein Inlb: Crystal F
authors	H.H.Niemann, V.Jager, P.J.G.Butler, J.Van Den Heuvel, S.Schmidt, D.Ferraris, E.Gherardi, D.W.Heinz
compound		source
Molecule: Internalin B Chain: A, C Fragment: Internalin Domain (Cap, Lrr, Ir), Inlb321, Residu Synonym: Inlb Engineered: Yes		Organism_scientific: Listeria Monocytogenes Organism_taxid: 169963 Strain: Egd-E Variant: Serovar 12a Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21 Codonplus (De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Petm30
Molecule: Hepatocyte Growth Factor Receptor Chain: B, D Fragment: Sema, Psi, Ig1, Met741, Residues 25-740 Synonym: Hgf Receptor, Scatter Factor Receptor, Sf Receptor Receptor, Met Proto-Oncogene Tyrosine Kinase, C-Met; Engineered: Yes Other_details: Contains Ig2 And 6his Tag, Which Are Poorly And Not Modeled, Met Was Enzymatically Deglycosylated With		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Cricetulus Griseus Expression_system_taxid: 10029 Expression_system_cell_line: Cho Lec 3.2.8.1 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pa71d
symmetry	Space Group: C 1 2 1	R_factor 0.268 R_Free 0.307
crystal cell	length a length b length c angle alpha angle beta angle gamma 214.500 66.700 181.500 90.00 123.30 90.00
method	X-Ray Diffraction	resolution	2.80 Å
Gene Ontology	Chain Function Process Component D, B
Primary reference	Structure of the Human Receptor Tyrosine Kinase Met in Complex with the Listeria Invasion Protein InlB., Niemann HH, Jager V, Butler PJ, van den Heuvel J, Schmidt S, Ferraris D, Gherardi E, Heinz DW, Cell. 2007 Jul 27;130(2):235-246. PMID:17662939

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (271 Kb) [Save to disk] Biological Unit Coordinates (2uzx.pdb1.gz) 134 Kb Biological Unit Coordinates (2uzx.pdb2.gz) 135 Kb CSU: Contacts of Structural Units for 2UZX Structure Factors (434 Kb) Retrieve 2UZX in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2UZX from S2C, [Save to disk] Re-refined 2uzx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2UZX in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2UZX

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2UZX, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2uzx_B] [2uzx_A] [2uzx] [2uzx_D] [2uzx_C] SWISS-PROT database: [P25147] [P08581] Domain organization of [INLB_LISMO] [MET_HUMAN] by SWISSPFAM Domains found in 2UZX: [IPT] [LRR] [PSI] [Sema ] by SMART

Other resources with information on 2UZX

Community annotation for 2UZX at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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