2V1C Recombination date May 23, 2007
title Crystal Structure And Mutational Study Of Recor Provide Insi Its Role In Dna Repair
authors J.Timmins, I.Leiros, S.Mcsweeney
compound source
Molecule: Recombination Protein Recr
Chain: A, B
Synonym: Recr
Engineered: Yes
Organism_scientific: Deinococcus Radiodurans
Organism_taxid: 243230
Strain: R1
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector: Pdest17

Molecule: Hypothetical Protein
Chain: C
Synonym: Reco
Engineered: Yes

Organism_scientific: Deinococcus Radiodurans
Organism_taxid: 243230
Strain: R1
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector: Pdest17
symmetry Space Group: C 1 2 1
R_factor 0.459 R_Free 0.443
crystal
cell
length a length b length c angle alpha angle beta angle gamma
144.000 83.200 66.600 90.00 106.90 90.00
method X-Ray Diffractionresolution 3.80 Å
ligand ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


C


Primary referenceCrystal structure and mutational study of RecOR provide insight into its mode of DNA binding., Timmins J, Leiros I, McSweeney S, EMBO J. 2007 Jul 11;26(13):3260-71. Epub 2007 Jun 21. PMID:17581636
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (88 Kb) [Save to disk]
  • Biological Unit Coordinates (2v1c.pdb1.gz) 159 Kb
  • LPC: Ligand-Protein Contacts for 2V1C
  • CSU: Contacts of Structural Units for 2V1C
  • Likely Quarternary Molecular Structure file(s) for 2V1C
  • Structure Factors (57 Kb)
  • Retrieve 2V1C in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2V1C from S2C, [Save to disk]
  • Re-refined 2v1c structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2V1C in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2V1C
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2V1C, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2v1c_A] [2v1c_B] [2v1c] [2v1c_C]
  • SWISS-PROT database: [Q9RW50] [Q9ZNA2]
  • Domain organization of [Q9RW50_DEIRA] [RECR_DEIRA] by SWISSPFAM
  • Domains found in 2V1C: [HhH1] [TOPRIM ] by SMART
  • Other resources with information on 2V1C
  • Community annotation for 2V1C at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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