2V3B Oxidoreductase date Jun 14, 2007
title Crystal Structure Of The Electron Transfer Complex Rubredoxi Rubredoxin Reductase From Pseudomonas Aeruginosa.
authors G.Hagelueken, L.Wiehlmann, T.M.Adams, H.Kolmar, D.W.Heinz, B.Tuem D.Schubert
compound source
Molecule: Rubredoxin Reductase
Chain: A
Engineered: Yes
Organism_scientific: Pseudomonas Aeruginosa
Organism_taxid: 208964
Strain: Pao1
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Rubredoxin 2
Chain: B
Synonym: Rubredoxin
Engineered: Yes

Organism_scientific: Pseudomonas Aeruginosa
Organism_taxid: 208964
Strain: Pao1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 2 2 21
R_factor 0.181 R_Free 0.246
crystal
cell
length a length b length c angle alpha angle beta angle gamma
61.070 97.150 81.260 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.45 Å
ligand FAD, FE enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


B
  • electron transfer activity


  • Primary referenceCrystal structure of the electron transfer complex rubredoxin rubredoxin reductase of Pseudomonas aeruginosa., Hagelueken G, Wiehlmann L, Adams TM, Kolmar H, Heinz DW, Tummler B, Schubert WD, Proc Natl Acad Sci U S A. 2007 Jul 24;104(30):12276-81. Epub 2007 Jul 16. PMID:17636129
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (80 Kb) [Save to disk]
  • Biological Unit Coordinates (2v3b.pdb1.gz) 75 Kb
  • LPC: Ligand-Protein Contacts for 2V3B
  • CSU: Contacts of Structural Units for 2V3B
  • Likely Quarternary Molecular Structure file(s) for 2V3B
  • Structure Factors (244 Kb)
  • Retrieve 2V3B in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2V3B from S2C, [Save to disk]
  • Re-refined 2v3b structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2V3B in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2V3B
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2V3B, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2v3b] [2v3b_A] [2v3b_B]
  • SWISS-PROT database: [Q9HTK8] [Q9HTK9]
  • Domain organization of [RUBR2_PSEAE] [RURE_PSEAE] by SWISSPFAM
  • Other resources with information on 2V3B
  • Community annotation for 2V3B at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
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