2V7A Transferase date Jul 27, 2007
title Crystal Structure Of The T315i Abl Mutant In Complex With Th Inhibitor Pha-739358
authors M.Modugno, E.Casale, C.Soncini, P.Rosettani, R.Colombo, R.Lupi, L. D.Fancelli, P.Carpinelli, A.D.Cameron, A.Isacchi, J.Moll
compound source
Molecule: Proto-Oncogene Tyrosine-Protein Kinase Abl1
Chain: A, B
Fragment: Kinase Domain, Residues 229-512
Synonym: Abelson Murine Leukemia Viral Oncogene Homolog 1, Abl;
Ec: 2.7.10.2
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Autographa
Expression_system_taxid: 254361
Expression_system_cell_line: High Five
Expression_system_vector_type: Baculovirus
symmetry Space Group: P 62
R_factor 0.207 R_Free 0.246
crystal
cell
length a length b length c angle alpha angle beta angle gamma
159.757 159.757 56.931 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.50 Å
ligand 627, MG, PTR enzyme Transferase E.C.2.7.10.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystal Structure of the T315I Abl Mutant in Complex with the Aurora Kinases Inhibitor PHA-739358., Modugno M, Casale E, Soncini C, Rosettani P, Colombo R, Lupi R, Rusconi L, Fancelli D, Carpinelli P, Cameron AD, Isacchi A, Moll J, Cancer Res. 2007 Sep 1;67(17):7987-90. PMID:17804707
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (100 Kb) [Save to disk]
  • Biological Unit Coordinates (2v7a.pdb1.gz) 48 Kb
  • Biological Unit Coordinates (2v7a.pdb2.gz) 48 Kb
  • LPC: Ligand-Protein Contacts for 2V7A
  • CSU: Contacts of Structural Units for 2V7A
  • Likely Quarternary Molecular Structure file(s) for 2V7A
  • Structure Factors (221 Kb)
  • Retrieve 2V7A in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2V7A from S2C, [Save to disk]
  • Re-refined 2v7a structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2V7A in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2V7A
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2V7A, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2v7a_A] [2v7a] [2v7a_B]
  • SWISS-PROT database: [P00519]
  • Domain organization of [ABL1_HUMAN] by SWISSPFAM
  • Domain found in 2V7A: [TyrKc ] by SMART
  • Other resources with information on 2V7A
  • Community annotation for 2V7A at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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