2V7P	Oxidoreductase	date	Jul 31, 2007
title	Crystal Structure Of Lactate Dehydrogenase From Thermus Ther Hb8 (Holo Form)
authors	N.Coquelle, E.Fioravanti, M.Weik, F.Vellieux
compound		source
Molecule: L-Lactate Dehydrogenase Chain: A, B, C, D Synonym: Lactate Dehydrogenase, L-Ldh Ec: 1.1.1.27 Engineered: Yes		Organism_scientific: Thermus Thermophilus Organism_taxid: 300852 Strain: Hb8 Expression_system: Escherichia Coli Dh5[Alpha] Expression_system_taxid: 668369 Expression_system_plasmid: Ptthldh12
symmetry	Space Group: P 21 21 21	R_factor 0.192 R_Free 0.204
crystal cell	length a length b length c angle alpha angle beta angle gamma 151.500 142.850 59.570 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.10 Å
ligand	NAD, OXM	enzyme	Oxidoreductase E.C.1.1.1.27 BRENDA
Gene Ontology	Chain Function Process Component A, D, C, B
Primary reference	Activity, stability and structural studies of lactate dehydrogenases adapted to extreme thermal environments., Coquelle N, Fioravanti E, Weik M, Vellieux F, Madern D, J Mol Biol. 2007 Nov 23;374(2):547-62. Epub 2007 Sep 22. PMID:17936781

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (198 Kb) [Save to disk] Biological Unit Coordinates (2v7p.pdb1.gz) 192 Kb LPC: Ligand-Protein Contacts for 2V7P CSU: Contacts of Structural Units for 2V7P Likely Quarternary Molecular Structure file(s) for 2V7P Structure Factors (589 Kb) Retrieve 2V7P in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2V7P from S2C, [Save to disk] Re-refined 2v7p structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2V7P in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2V7P

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2V7P, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2v7p_B] [2v7p_C] [2v7p_A] [2v7p_D] [2v7p] SWISS-PROT database: [Q5SJA1] Domain organization of [LDH_THET8] by SWISSPFAM

Other resources with information on 2V7P

Community annotation for 2V7P at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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