2VB5 Immune System date Sep 06, 2007
title Solution Structure Of W60g Mutant Of Human Beta2-Microglobul
authors G.Esposito, A.Corazza, E.Rennella, D.Gumral, M.C.Mimmi, F.Fogolar P.Viglino, S.Raimondi, S.Giorgetti, B.Bolognesi, G.Merlini, M.St V.Bellotti
compound source
Molecule: Beta-2-Microglobulin
Chain: A
Engineered: Yes
Mutation: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21de3
Expression_system_plasmid: Phn1
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A
  • cellular response to iron io...

    • Primary referenceThe controlling roles of Trp60 and Trp95 in beta2-microglobulin function, folding and amyloid aggregation properties., Esposito G, Ricagno S, Corazza A, Rennella E, Gumral D, Mimmi MC, Betto E, Pucillo CE, Fogolari F, Viglino P, Raimondi S, Giorgetti S, Bolognesi B, Merlini G, Stoppini M, Bolognesi M, Bellotti V, J Mol Biol. 2008 May 9;378(4):885-95. Epub 2008 Mar 8. PMID:18395224
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (627 Kb) [Save to disk]
  • Biological Unit Coordinates (2vb5.pdb1.gz) 32 Kb
  • CSU: Contacts of Structural Units for 2VB5
  • Original NMR restraints for 2VB5 from PDB
  • Retrieve 2VB5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2VB5 from S2C, [Save to disk]
    • View 2VB5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2VB5
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2VB5, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1m2vb5, region B:216-300 [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2vb5_A] [2vb5]
  • SWISS-PROT database: [P61769]
  • Domain organization of [B2MG_HUMAN] by SWISSPFAM
  • Domain found in 2VB5: [IGc1 ] by SMART
    • Other resources with information on 2VB5
  • Community annotation for 2VB5 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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