2VNG	Hydrolase	date	Feb 04, 2008
title	Family 51 Carbohydrate Binding Module From A Family 98 Glyco Hydrolase Produced By Clostridium Perfringens In Complex Wi Group A-Trisaccharide Ligand.
authors	K.J.Gregg, R.Finn, D.W.Abbott, A.B.Boraston
compound		source
Molecule: Cpe0329 Chain: A, B Fragment: Carbohydrate-Binding Module Family 51, Residues 2 Synonym: Glycoside Hydrolase Family 98 Ec: 3.2.1.- Engineered: Yes		Organism_scientific: Clostridium Perfringens Organism_taxid: 1502 Atcc: 13124 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21 De3 Star Expression_system_plasmid: Pet28a
symmetry	Space Group: P 21 21 2	R_factor 0.184 R_Free 0.235
crystal cell	length a length b length c angle alpha angle beta angle gamma 69.683 98.754 49.241 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.40 Å
ligand	A2G, CA, FUC, GAL	enzyme	Hydrolase E.C.3.2.1 BRENDA
Primary reference	Divergent modes of glycan recognition by a new family of carbohydrate-binding modules., Gregg KJ, Finn R, Abbott DW, Boraston AB, J Biol Chem. 2008 Feb 21;. PMID:18292090

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (137 Kb) [Save to disk] Biological Unit Coordinates (2vng.pdb1.gz) 66 Kb Biological Unit Coordinates (2vng.pdb2.gz) 67 Kb LPC: Ligand-Protein Contacts for 2VNG CSU: Contacts of Structural Units for 2VNG Likely Quarternary Molecular Structure file(s) for 2VNG Structure Factors (935 Kb) Retrieve 2VNG in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2VNG from S2C, [Save to disk] Re-refined 2vng structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2VNG in 3D

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Visual 3D analysis of 2VNG

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2VNG, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2vng_A] [2vng_B] [2vng] SWISS-PROT database: [Q8XNK4] Domain organization of [Q8XNK4_CLOPE] by SWISSPFAM Domain found in 2VNG: [NPCBM ] by SMART

Other resources with information on 2VNG

Community annotation for 2VNG at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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