2VRG Transport date Apr 04, 2008
title Structure Of Human Mcfd2
authors J.E.Guy, E.Wigren, M.Svard, T.Hard, Y.Lindqvist
compound source
Molecule: Multiple Coagulation Factor Deficiency Protein 2
Chain: A
Synonym: Neural Stem Cell-Derived Neuronal Survival Protein
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_vector: Pet28
methodSolution NMR
ligand CA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceNew Insights into Multiple Coagulation Factor Deficiency from the Solution Structure of Human MCFD2., Guy JE, Wigren E, Svard M, Hard T, Lindqvist Y, J Mol Biol. 2008 Jun 20;. PMID:18590741
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (418 Kb) [Save to disk]
  • Biological Unit Coordinates (2vrg.pdb1.gz) 22 Kb
  • LPC: Ligand-Protein Contacts for 2VRG
  • CSU: Contacts of Structural Units for 2VRG
  • Original NMR restraints for 2VRG from PDB
  • Retrieve 2VRG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2VRG from S2C, [Save to disk]
    • View 2VRG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2VRG
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2VRG, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2vrg_A] [2vrg]
  • SWISS-PROT database: [Q8NI22]
  • Domain organization of [MCFD2_HUMAN] by SWISSPFAM
    • Other resources with information on 2VRG
  • Community annotation for 2VRG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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