2VZ5	Protein Binding	date	Jul 30, 2008
title	Structure Of The Pdz Domain Of Tax1 (Human T-Cell Leukemia V I) Binding Protein 3
authors	J.W.Murray, N.Shafqat, W.Yue, E.Pilka, C.Johannsson, E.Salah, C.Co J.M.Elkins, A.C.Pike, A.Roos, P.Filippakopoulos, F.Von Delft, M.Wickstroem, C.Bountra, A.M.Edwards, C.H.Arrowsmith, U.Opperma
compound		source
Molecule: Tax1-Binding Protein 3 Chain: A Fragment: Pdz Domain, Residues 13-113 Synonym: Tax Interaction Protein 1, Tip-1, Glutaminase-Inte Protein, Human T-Cell Leukemia Virus Type I Binding Protein Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Rosetta-R3
symmetry	Space Group: P 65 2 2	R_factor 0.174 R_Free 0.226
crystal cell	length a length b length c angle alpha angle beta angle gamma 59.813 59.813 121.289 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	1.74 Å
ligand	CL, IMD, ZN	enzyme
Gene Ontology	Chain Function Process Component A

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (60 Kb) [Save to disk] Biological Unit Coordinates (2vz5.pdb1.gz) 55 Kb LPC: Ligand-Protein Contacts for 2VZ5 CSU: Contacts of Structural Units for 2VZ5 Likely Quarternary Molecular Structure file(s) for 2VZ5 Structure Factors (567 Kb) Retrieve 2VZ5 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2VZ5 from S2C, [Save to disk] Re-refined 2vz5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2VZ5 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2VZ5

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2VZ5, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2vz5] [2vz5_A] SWISS-PROT database: [O14907] Domain organization of [TX1B3_HUMAN] by SWISSPFAM Domain found in 2VZ5: [PDZ ] by SMART

Other resources with information on 2VZ5

Community annotation for 2VZ5 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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